Author Archives: curiouscat

Fish Discovery: Breathes Air for Months at a Time

Fish Lives in Logs, Breathing Air, for Months at a Time:

A tiny Western Atlantic fish does something never before seen: It makes like a bird, living in mangrove wood for months at a time. A team of U.S. and English scientists accidentally discovered the unique behavior, which they call “logpacking,” during recent excursions to Belize and Florida. They were studying how the mangrove rivulus—an animal already infamous for its bizarre sexual behavior—survived the frequent dry spells that strike its swampy forest habitat.

“One of us kicked at a log, which broke apart and out came the fish!” said team leader Scott Taylor of Brevard County, Florida’s Environmentally Endangered Lands Program. The mangrove rivulus, also known as the mangrove killifish, is native to the Americas and is about two inches (five centimeters) long. The fish has long been studied for its many unique features.

It’s the only vertebrate known to naturally self-fertilize, for example. In some populations, it can become a hermaphrodite, developing both male and female parts simultaneously, to produce clones of itself. The animal can also live out of water for up to 66 days, Taylor said, and is one of very few fish species that spend their entire lives in mangrove swamps. Most fish move in and out of the areas as water sources dwindle.

New and Old Ways to Make Flu Vaccines

New and Old Ways to Make Flu Vaccines by Nell Greenfieldboyce, NPR:

Standard Practice
Pros: Millions of Americans receive this [standard] vaccine every year. It’s safe and well tolerated. Its production begins in hens’ eggs — a tried and true technology for 50 years.
Cons: Eggs must be ordered many months in advance, and millions of doses require millions of eggs.

Live-Attenuated Vaccine
Pros: This newer method of production results in a vaccine that has a flu virus that is crippled, so it can’t cause disease. But the virus is not killed, as is the case in the standard vaccine. The vaccine also can be given as a nasal spray.
Cons: More expensive than standard vaccine, and also produced in eggs. Not approved for young children or older people.

Cell-Based Vaccine
Pros: This vaccine can be produced in giant vats of living cells. Such a production method means it can be scaled up much faster than egg-based vaccines, making it more useful in a pandemic. Several versions have been tested successfully in people.
Cons: Won’t be widely available for a few years. Clinical trials are under way, but no flu vaccine made this way is currently approved by the Food and Drug Administration.

Home Use Vertical Axis Wind Turbine

Photo of Winterra Turbine

The Windterra ECO1200 Wind Turbine is a revolutionary Vertical Axis Wind Turbine (VAWT).

Omni-directional: The ECO1200 can instantaneously accept wind from any direction as opposed to HAWTs (Horizontal Axis Wind Turbines, which require an on-board motor to rotate the unit relative to wind direction.
Turbulent-wind friendly: The ECO1200 is easily roof mountable and is less affected by turbulent air, making ECO1200 suited for areas where houses and trees may disturb airflow.
All-in-one system: The ECO 1200is a complete power-generation package, including turbine, controller/inverter, and mounting system. This system can typically be installed and ready to use in four to five hours.
Roof-top mounting: The ECO1200 is designed for roof top use, eliminating the need for a pole or tower installation that significantly increase cost and complicate routine maintenance.

Interesting looking. Based on some of the figures on their site it seems like this is still pushing the economic justification but with more and more engineers improving such similar system hopefully wind power can meet more of our energy needs over time.

Cat Joins Exclusive Genome Club

Cat joins exclusive genome club

The domestic cat now joins the select club of mammals whose genome has been deciphered – including dogs, chimps, rats, mice, cows and people. The genome map is expected to shed light on both feline and human disease. Cats get hundreds of illnesses similar to human ones, including a feline version of HIV, known as FIV, and a hereditary form of blindness.
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Cats are among the 26 mammals chosen by the National Human Genome Research Institute in the US for less complete or “light” genome sequencing. Scientists use the so-called “shot-gun” sequencing method, where DNA is extracted, chopped into pieces, sequenced, and then pieced back together again.

It has yielded a rough version of the cat genome, including around 60% of Cinnamon’s DNA “letters” with many gaps in between. A more complete version, expected next year, will be used to make more detailed comparisons with other animals.

Vast Garbage Float in the Pacific Ocean

Feds want to survey, possibly clean up vast garbage pit in Pacific:

Charles Moore, the marine researcher at the Algalita Marina Research Foundation in Long Beach who has been studying and publicizing the patch for the past 10 years, said the debris – which he estimates weighs 3 million tons and covers an area twice the size of Texas – is made up mostly of fine plastic chips and is impossible to skim out of the ocean. “Any attempt to remove that much plastic from the oceans – it boggles the mind,” Moore said from Hawaii, where his crew is docked. “There’s just too much, and the ocean is just too big.”

The trash collects in one area, known as the North Pacific Gyre, due to a clockwise trade wind that circulates along the Pacific Rim. It accumulates the same way bubbles gather at the center of hot tub, Moore said. A two-liter plastic bottle that begins its voyage from a storm drain in San Francisco will get pulled into the gyre and take weeks to reach its place among the other debris in the Garbage Patch. While the bottle floats along, instead of biodegrading, it will “photodegrade,” Moore said – the sun’s UV rays will turn the bottle brittle, much like they would crack the vinyl on a car roof. They will break down the bottle into small pieces and, in some cases, into particles as fine as dust.

CMU Wins $2 million in Urban Robot Auto Race

CMU wins $2 million in urban robot race

Carnegie Mellon University won the $2 million first place prize in DARPA’s urban robot race this weekend, stealing the thunder from 2005’s Grand Challenge leader, Stanford University. The Defense Advanced Research Projects Agency (DARPA) Urban Challenge awarded a total of $3.5 million in prizes on Sunday, a day after the race. Stanford University took second place, with a $1 million cash prize, and Virginia Tech won $500,000 for third place.

The Urban Challenge was a six-hour test of driverless vehicles on the suburban roads of the former George Air Force Base in Oro Grande, Calif., where the robotic cars were required to complete three missions while obeying traffic laws and avoiding obstacles and collisions with other driverless vehicles. The challenge was the first ever to test robots driving among other robots, and it was significantly harder than DARPA’s 2005 desert Grand Challenge because of that interplay and the urban setting, according to race officials.

Reusable Paper

Xerox’s Reusable Paper

Almost half of the paper used in American offices is for daily use. It is for display, not storage and, at the end of the day, it’s in the trash can. All of the energy that was put into harvesting, processing, and shipping that paper was, in the end, for less than a day’s use. A number of companies are working on alternatives to this procedure.
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The system is based on ‘paper’ that contains light sensitive materials. When exposed to certain wavelengths of light, the paper changes to a darker that then slowly fades. Neither the light-sensitive paper, nor the light printers are ready for consumers

Interesting. It is great to see all the efforts undertaken by scientists and engineers to improve. The more we can have working everywhere in the world the better off we will be.

Open Access Legislation May Be Included in HHS Budget Bill

Open Access to Research Funded by U.S. Is at Issue by Rick Weiss:

The idea is that consumers should not have to buy expensive scientific journal subscriptions — or be subject to pricey per-page charges for nonsubscribers — to see the results of research they have already paid for with their taxes. Until now, repeated efforts to legislate such a mandate have failed under pressure from the well-heeled journal publishing industry and some nonprofit scientific societies whose educational activities are supported by the profits from journals that they publish.

But proponents — including patient advocates, who want easy access to the latest biomedical findings, and cash-strapped libraries looking for ways to temper escalating subscription costs — have parlayed their consumer-friendly “public access” message into legislative language that has made it into the Senate and House versions of the new HHS bill.

The opponents of open science are lobbying to keep scientific research funded by taxpayers unavailable to the public. As I have said before it is time to stop supporting those who attempt to stop scientific progress. The out of date thinking behind closed access journals should be discouraged and those journals fighting progress should not be supported. This legislation would bring openness to federal research in a similar manner to the steps taken by Howard Hughes Medical Institute announced for research they fund.

The Study of Bee Colony Collapses Continues

The attempts to discover the causes of the die off of bees in the USA continues. This effort provides a good example of the difficulty of learning what really happens around us. Often, once things are worked out, and explained they seem simple and even obvious. But while trying to figure events taking place (like the bee colony collapses), scientists have significant challenges. The hard work and the application of scientific concepts by scientists allow us to learn and adapt. I think the difficulty can paint a valuable picture of what science is about. That search for understanding is wonderful to see and something fundamental to the human experience. Disappearing Bee Mystery Deepens

One year ago, beekeepers across the country began to report that worker bees were inexplicably abandoning their hives and leaving the brood to die. Although firm statistics are hard to come by, so-called colony collapse disorder may have afflicted as many as 25% of U.S. beekeepers and perhaps others around the world. Possible culprits included pesticides, parasites, and chronic stress from poor nutrition and the long-distance truck rides that many commercial hives undergo.
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For that matter, no one has yet shown that IAPV can cause colonies to collapse. “Until you have introduced the virus and caused disease, you’re just postulating,” cautions Bruce Webb, an entomologist at the University of Kentucky in Lexington. “The conclusive data are not in.”

Presidential Early Career Awards for Scientists and Engineers

The Presidential Early Career Awards for Scientists and Engineers, established in 1996, honors the most promising researchers in the Nation within their fields. Nine federal departments and agencies annually nominate scientists and engineers who are at the start of their independent careers and whose work shows exceptional promise for leadership at the frontiers of scientific knowledge. Participating agencies award these talented scientists and engineers with up to five years of funding to further their research in support of critical government missions.

Awards were announced today – links to some of the awardees:

Jelena Vuckovic, Assistant Professor of Electrical Engineering, Stanford University
Matthew Rodell, Physical Scientist, NASA
Katerina Akassoglou, Assistant Professor of Pharmacology, University of California, San Diego
Carlos Rinaldi, Associate Professor of Chemical Engineering University of Puerto Rico at MayagÃ¼ez
Ahna Skop, Assistant Professor of Genetics, University of Wisconsin-Madison
Krystyn J. Van Vliet, Assistant Professor of Materials Science and Engineering, MIT
Odest Chadwicke Jenkins, Assistant Professor, Department of Computer Science, Brown University