Category Archives: Science

Graphene: Engineered Carbon

Graphene, a form of the element carbon that is just a single atom thick, had been identified as a theoretical possibility as early as 1947.
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Its unique electrical characteristics could make graphene the successor to silicon in a whole new generation of microchips, surmounting basic physical constraints limiting the further development of ever-smaller, ever-faster silicon chips.

But that’s only one of the material’s potential applications. Because of its single-atom thickness, pure graphene is transparent, and can be used to make transparent electrodes for light-based applications such as light-emitting diodes (LEDs) or improved solar cells.
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Graphene could also substitute for copper to make the electrical connections between computer chips and other electronic devices, providing much lower resistance and thus generating less heat. And it also has potential uses in quantum-based electronic devices that could enable a new generation of computation and processing.

“The field is really in its infancy,” says Michael Strano, associate professor of chemical engineering who has been investigating the chemical properties of graphene. “I don’t think there’s any other material like this.”

The mobility of electrons in graphene — a measure of how easily electrons can flow within it — is by far the highest of any known material. So is its strength, which is, pound for pound, 200 times that of steel. Yet like its cousin diamond, it is a remarkably simple material, composed of nothing but carbon atoms arranged in a simple, regular pattern.

“It’s the most extreme material you can think of,” says Palacios. “For many years, people thought it was an impossible material that couldn’t exist in nature, but people have been studying it from a theoretical point of view for more than 60 years.”

European Eels in Crisis After 95% Decline in Last 25 years

Eels in crisis after 95% decline in last 25 years

But the action the Environment Agency is about to take is upsetting those who rely on the eel for their livelihoods. A ban on exporting eels out of Europe – they are a popular dish in the far east – is proposed, along with a plan to severely limit the fishing season and the number of people who will be allowed licences.

It seems pretty obvious we have over-fished the oceans. Without effective regulation we will destroy the future of both the wildlife and our food source.

The eel remains one of the world’s most mysterious creatures. It is generally accepted that European eels – Anguilla anguilla – are born in the Sargasso Sea near Bermuda.

As leaf-like larvae, they are swept by the Gulf Stream towards Europe, a journey that may take a year. When the larvae reach the continental shelf they change into “glass eels” and in the spring begin to move through estuaries and into freshwater.

The animals develop pigmentation, at which point they are known as elvers and are similar in shape to the adult eel. Elvers continue to move upstream and again change colour to become brown or yellow eels.

When the fish reach full maturity – some can live to 40 and grow to 1m long – they migrate back to the ocean. Females are reported to carry as many as 10m eggs. They return to the Sargasso Sea, spawn and die.

Antigen Shift in Influenza Viruses

Antigenic shift is the process by which at least two different strains of a virus, (or different viruses), especially influenza, combine to form a new subtype having a mixture of the surface antigens of the two original strains.

Pigs can be infected with human, avian and swine influenza viruses. Because pigs are susceptible to all three they can be a breeding ground for antigenic shift (as in the recent case of H1N1 Flu – Swine Flu) allowing viruses to mix and create a new virus.

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Merck and Elsevier Publish Phony Peer-Review Journal

Elsevier is one of those publishers fighting open science. They try to claim that the government publishing government funded research in an open way will tarnish science. The argument makes no sense to me. Here is another crazy action on their part: they published a “journal” funded by Merck to promote Merck products. Merck Makes Phony Peer-Review Journal:

Merck cooked up a phony, but real sounding, peer reviewed journal and published favorably looking data for its products in them. Merck paid Elsevier to publish such a tome, which neither appears in MEDLINE or has a website, according to The Scientist.
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What’s sad is that I’m sure many a primary care physician was given literature from Merck that said, “As published in Australasian Journal of Bone and Joint Medicine, Fosamax outperforms all other medications….” Said doctor, or even the average researcher wouldn’t know that the journal is bogus. In fact, knowing that the journal is published by Elsevier gives it credibility!

As I have said the journals fighting open science should have their credibility questioned. They are putting their outdated business model above science. We should not see organizations that are focused on closing science research through deceptive publicity efforts and lobbying efforts as credible.

New Largest Known Cave

photo of world's largest known cave, in Vietnam

The world’s largest cave

A British caving team believe they have discovered the world’s largest cave passage in the heart of the Vietnamese jungle. The rocky passage is 150metres long and measures a towering 200metres in height – seven times as high as the vaulted ceiling of York Cathedral.
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Called Hang Son Doong (Mountain River Cave) it is believed to be almost twice the size of the current record holder
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The cave was originally discovered in 1991 by a Vietnamese Jungle man called Ho Khanh. However Mr Spillane said no-one had entered if before because ‘it emitted a frightful wind and noise which was due to a large underground river’.

Influenza Pandemic Alert Raised to Level 5 (of 6)

WHO Director-General, Dr Margaret Chan, announced today that she has “decided to raise the current level of influenza pandemic alert from phase 4 to phase 5.” And she further comments:

Let me remind you. New diseases are, by definition, poorly understood. Influenza viruses are notorious for their rapid mutation and unpredictable behaviour. WHO and health authorities in affected countries will not have all the answers immediately, but we will get them.

WHO will be tracking the pandemic at the epidemiological, clinical, and virological levels. All countries should immediately activate their pandemic preparedness plans. Countries should remain on high alert for unusual outbreaks of influenza-like illness and severe pneumonia.

At this stage, effective and essential measures include heightened surveillance, early detection and treatment of cases, and infection control in all health facilities.

I have reached out to companies manufacturing antiviral drugs to assess capacity and all options for ramping up production. I have also reached out to influenza vaccine manufacturers that can contribute to the production of a pandemic vaccine.

The biggest question, right now, is this: how severe will the pandemic be, especially now at the start?

It is possible that the full clinical spectrum of this disease goes from mild illness to severe disease. We need to continue to monitor the evolution of the situation to get the specific information and data we need to answer this question.

From past experience, we also know that influenza may cause mild disease in affluent countries, but more severe disease, with higher mortality, in developing countries.

No matter what the situation is, the international community should treat this as a window of opportunity to ramp up preparedness and response.

Above all, this is an opportunity for global solidarity as we look for responses and solutions that benefit all countries, all of humanity. After all, it really is all of humanity that is under threat during a pandemic.

As I have said, we do not have all the answers right now, but we will get them.
—- end of her remarks —-
The latest WHO Epidemic and Pandemic Alert and Response release puts the total number of confirmed cases at 148, in 9 countries, with 8 deaths. Mexico has many more suspected cases but just 26 confirmed cases. The CDC Swine Influenza site, puts the total number of confirmed cases in the USA at 91, in 10 states, with 1 death.

President’s Council of Advisors on Science and Technology

Today, during remarks at the National Academy of Sciences, President Barack Obama announced the President’s Council of Advisors on Science and Technology (PCAST).

PCAST is an advisory group of the nation’s leading scientists and engineers who will advise the President and Vice President and formulate policy in the many areas where understanding of science, technology, and innovation is key to strengthening our economy and forming policy that works for the American people.

President Barack Obama said, “This council represents leaders from many scientific disciplines who will bring a diversity of experience and views. I will charge PCAST with advising me about national strategies to nurture and sustain a culture of scientific innovation.”

PCAST will be co-chaired by John Holdren, Assistant to the President for Science and Technology and Director of the White House Office of Science and Technology Policy; Eric Lander, Director of the Broad Institute of MIT and Harvard and one of the principal leaders of the Human Genome Project; and Harold Varmus, President and CEO of Memorial Sloan-Kettering Cancer Center, former head of the National Institutes of Health and a Nobel laureate.

Members of the council include: Shirley Ann Jackson, Craig Mundie, Eric Schmidt and Ahmed Zewail.

Lenz’s Law in Action: Eddy Current Tubes

Eddy Current Tubes — Drop the Magnets down the tube. An eddy current is set up in a conductor in response to a changing magnetic field. Lenz’s law predicts that the current moves in such a way as to create a magnetic field opposing the change; to do this in a conductor, electrons swirl in a plane perpendicular to the changing magnetic field.

Because the magnetic fields of the eddy currents oppose the magnetic field of the falling magnet; there is attraction between the two fields. Energy is converted into heat. This principle is used in damping the oscillation of the lever arm of mechanical balances.

Evolutionary Robotics

Evolutionary Robotics, chapter of Handbook of Robotics, is interesting and includes a good explanation of the difference between evolution and learning:

Evolution and learning (or phylogenetic and ontogenetic
adaptation) are two forms of biological adaptation that differ in space and time. Evolution is a process of selective reproduction and substitution based on the existence of a population of individuals displaying variability at the genetic level. Learning, instead, is a set of modifications taking place within each single individual during its own life time.

Evolution and learning operate on different time scales. Evolution is a form of adaptation capable of capturing relatively slow environmental changes that

might encompass several generations (e.g., the perceptual characteristics of food sources for a given species). Learning, instead, allows an individual to adapt to environmental modifications that are unpredictable at the generational level. Learning might include a variety of mechanisms that produce adaptive changes in an individual during its lifetime, such as physical development, neural maturation, variation of the connectivity between neurons, and synaptic plasticity. Finally, whereas evolution operates on the genotype, learning affects only the phenotype and phenotypic modifications cannot directly modify the genotype.
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Recent research showed that teams of evolved robots can: (a) develop robust and effective behavior, (b) display an ability to differentiate their behavior so
to better cooperate; (c) develop communication capabilities and a shared communication system.

Artificial Intelligence Finds Ancient Indus Script Matches Spoken Language

Artificial Intelligence Cracks 4,000-Year-Old Mystery by Brandon Keim

An ancient script that’s defied generations of archaeologists has yielded some of its secrets to artificially intelligent computers.
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The Indus script, used between 2,600 and 1,900 B.C. in what is now eastern Pakistan and northwest India, belonged to a civilization as sophisticated as its Mesopotamian and Egyptian contemporaries. However, it left fewer linguistic remains. Archaeologists have uncovered about 1,500 unique inscriptions from fragments of pottery, tablets and seals. The longest inscription is just 27 signs long.
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They fed the program sequences of four spoken languages: ancient Sumerian, Sanskrit and Old Tamil, as well as modern English. Then they gave it samples of four non-spoken communication systems: human DNA, Fortran, bacterial protein sequences and an artificial language.

The program calculated the level of order present in each language. Non-spoken languages were either highly ordered, with symbols and structures following each other in unvarying ways, or utterly chaotic. Spoken languages fell in the middle.

When they seeded the program with fragments of Indus script, it returned with grammatical rules based on patterns of symbol arrangement. These proved to be moderately ordered, just like spoken languages.