Category Archives: Science

Dark Cosmos

I just finished reading Dark Cosmos: In Search of Our Universe’s Missing Mass and Energy by Dan Hooper. I found it an enjoyable read. The author writes well for a general audience, that like me, doesn’t have much of an knowledge of the topic. I think he did a good job of providing enough connection to the science but at a level that most interested in science could understand.

Some people think it is a bit too folksy, without enough science. I can see how some might feel this way, I think the balance is good but for those that want to dig into the details around dark matter and dark energy this is probably not the right book. For those that want to get a good idea of the basic concepts though I think this is a good choice. I like discussion of the process of scientific discovery – the uncertainly the adaption of ideas to new experimental results etc.. The tone is similar to Chaos and The Elegant Universe.

Related: science booksDan Hooper

ScienceMatters@Berkeley April 2007

As usually the latest issue of ScienceMatters@Berkeley includes several intersting articles including, The Protein Machine by Kathleen M. Wong

A large percentage of known antibiotics target bacterial ribosomes, including tetracycline, erythromycin, and streptomycin. Many of these antibiotics have been isolated from microbes themselves. “It’s a byproduct of the chemical warfare that’s been going on among bacteria for hundreds of millions of years,” Cate says. “We want to understand how these natural products inhibit translation. Then, based on what we understand about the ribosome mechanism, we should be able to come up with new ways to stop bacterial translation based on the old compounds.”

Self-Tuning Genes:

Researchers such as UC Berkeley’s Adam Arkin have found that regulatory feedback is associated with chance fluctuations in mRNA or protein levels—a phenomenon called expression noise. “Even though they’re all genetically identical, and grown under the same conditions, yeast clones don’t express certain proteins at exactly the same level,” Brem says. “Some genes are noisier than others. That makes people think the cell is actively tuning the distribution around an expression level set by the regulatory network.” Noise may ensure that a few individuals can handle abrupt changes in their environment. In other words, if a colony is suddenly assaulted by toxic chemicals or high heat, a few individuals will already have expression levels suited to those conditions.

Stanford Center for Professional Development Seminars

Free, Stanford Center for Professional Development seminar webcasts

During the autumn, winter and spring quarters, the Stanford Center for Professional Development makes it possible for the public to view a series of thought-provoking seminars on a broad range of topics. The weekly seminars feature presentations by distinguished Stanford faculty, senior researchers and industry experts. They are available for viewing online via streaming video.

Bioengineering and Biodesign Forum
Statistics for Research
Human-Computer Interaction
Entrepreneurship in Asian High-Tech Industries
Design and Manufacturing Forum
Lessons in Decision Making
Entrepreneurial Thought Leaders Seminar
Broadening the Appeal of Engineering to Women

Via: Stanford Engineering Research Seminars

Related: Science and Engineering WebcastsGoogle Tech TalksMore Great Science WebcastsUC-Berkeley Course Videos

CERN Pressure Test Failure

photo of Femilab inner triplet quadrupole at CERN

On March 27th a high-pressure test at CERN of a Fermilab-built ‘inner-triplet’ series of three quadrupole magnets in the tunnel of the Large Hadron Collider failed. Fermilab Director on the test failure:

We test the complex features we design thoroughly. In this case we are dumbfounded that we missed some very simple balance of forces. Not only was it missed in the engineering design but also in the four engineering reviews carried out between 1998 and 2002 before launching the construction of the magnets. Furthermore even though every magnet was thoroughly tested individually, they were never tested with the exact configuration that they would have when installed at CERN–thus missing the opportunity to discover the problem sooner.

We need and want to make sure that we find the root causes of the problem and from the lessons learned build a stronger institution. Beyond that, there is no substitute for the commitment each of us makes to excellence, to critical thinking and to sweating every detail.

In a Fermilab Update on Inner Triplet Magnets at LHC they state: “The goal at CERN and Fermilab is now to redesign and repair the inner triplet magnets and, if necessary, the DFBX without affecting the LHC start-up schedule. Teams at CERN and Fermilab have identified potential repairs that could be carried out expeditiously without removing undamaged triplet magnets from the tunnel.”

Related: Fermilab Statement on LHC Magnet Test FailureAccelerators and Nobel LaureatesFind the Root Cause Instead of the Person to Blame
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Climate Change Impacts, Adaptation and Vulnerability

Climate Change 2007: Climate Change Impacts, Adaptation and Vulnerability by the Intergovernmental Panel on Climate Change – summary (pdf) [the broken link has been removed]

Related articles: International report details impact of global warming [the broken link has been removed] – Climate change around the worldU.S., China Got Climate Warnings Toned Down – Permanent drought predicted for Southwest [paywall added so the broken link has been removed]

Solar Flares May Threaten GPS

Solar Bursts May Threaten GPS (site broke link so I removed it):

The cause for their concern, Johnson said, was an unexpected solar radio burst on Dec. 6 that affected virtually every GPS receiver on the lighted half of Earth. Some receivers had a reduction in accuracy while others completely lost the ability to determine position, he said.

And protecting the system is no simple task, added Paul M. Kintner Jr., a professor of electrical engineering at Cornell University, who monitored the December event. There are two possible ways to shield the system, he said, both very expensive. Either alter all GPS antennas to screen out solar signals or replace all of the GPS satellites with ones that broadcast a stronger signal.

That’s why it’s essential to learn more about the sun’s behavior quickly in an effort to find ways to predict such events, the researchers said. In addition to the GPS system, the December solar flare affected satellites and induced unexpected currents in the electrical grid, Johnson said.

Dale E. Gary, chairman of the physics department of the New Jersey Institute of Technology, said the burst produced 10 times more radio noise than any burst previously recorded.

Related: Solar StormsSolar Eruption Photo

Science Journalism

Don’t dumb me down by Ben Goldacre:

Science stories usually fall into three families: wacky stories, scare stories and “breakthrough” stories.

Last month there was an interesting essay in the journal PLoS Medicine, about how most brand new research findings will turn out to be false. It predictably generated a small flurry of ecstatic pieces from humanities graduates in the media, along the lines of science is made-up, self-aggrandising, hegemony-maintaining, transient fad nonsense; and this is the perfect example of the parody hypothesis that we’ll see later. Scientists know how to read a paper. That’s what they do for a living: read papers, pick them apart, pull out what’s good and bad.

Scientists never said that tenuous small new findings were important headline news – journalists did.

Interesting read, if a bit harsh, it serves to highlight real problems. There are good sources such as: Seed, National Geographic, Knight Science Journalism Tracker, PLoS, Scienceblogs -see more in our science links directory.

Related: Cancer Deaths, Declining Trend?Report on Use of Online Science ResourcesHow to Deal with False Research FindingsEat food. Not too much. Mostly plants. – – Another Paper Questions Scientific Paper Accuracy

Fellowship Winners

Several fellowships and scholarships have announced winners for this year:

As I have mentioned before I work for ASEE (which manages the NSF and NDSEG fellowships): this blog is my personal blog and is not associated with ASEE.

Find out more about these and other science and engineering fellowships and scholarships. Also see: How to Win a Graduate FellowshipNSF Undergraduate STEM Scholarships

Yale Cultivates Young Scientists

Yale Science and Engineering Association (YSEA), Outreach programs cultivate young scientists:

Since 1989, YSEA has funded high-school science fair awards all over the world; in 2006, 241 outstanding high school students were awarded YSEA medals. By getting the Yale name into the public consciousness, YSEA hopes to draw high school applicants who intend to major in the sciences.

For New Haven high school students, the New Haven Science Fair Program pairs them up with Yale graduate students for one-on-one mentorships. The students select a field that interests them, then develop an in-depth science fair project that teaches them about the scientific process. It’s an enjoyable introduction to the world of science research, and in early March, the students got the opportunity to show off what they’d learned in the yearly science fair, held in Commons.

Related: Science Education sites for students and teachersscience internshipsscience fairs